You can line anybody up at multiple positions, and, yes, their ratings do take a hit. Is it more of a hit than you get if you declare that player for that position? Maybe, I don't know. But I don't know of any practical difference an ATH staying at ATH versus moving to his best position would give you. The OVR is the same (sometimes better), so I assume that their "best"/"default" position gives the best AWR rating.
I agree with you that in the ideal circumstance, an ATH would be an ATH would be an ATH. However, there are some things that would have to be significantly re-worked (position minimums and CPU depth charts, for example), and I don't think that trade-off is worth it. Especially since, off the top of my head, I'm not sure there's a true disadvantage to moving an ATH to his best position.
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